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Linköping Institute of Technology

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Valid for year : 2003
 
TAMS23 Statistical methods in bioinformatics, 6 ECTS credits.
/Statistiska metoder i bioinformatik/

For:   C   D   IT   Mat  

  Area of Education: Natural Sciences

Subject area: Mathematics

  Advancement level (A-D): C

Aim:
Introduction to basic probabilistic and statistical techniques and models applied in bioinformatics and computational molecular biology

Prerequisites: (valid for students admitted to programmes within which the course is offered)
A first course in probabilty theory, a first course in statistical inference

Note: Admission requirements for non-programme students usually also include admission requirements for the programme and threshhold requirements for progression within the programme, or corresponding.

Organisation:
Lectures and computing exercises

Course contents:
Probability and statistical inference, Poisson processes and Markov chains, Random walks, Modelling of DNA sequences, Hidden markov models, estimation and hypothesis testing in problems of bioinformatics, continuous time Markov chains, models of evolution, Jukes and Cantor

Course literature:
Warren J. Ewens and Gregory R. Grant, Statistical methods in Bioinformatics. An Introduction. Springer 2001.

Examination:
One written examination
4 p
 



Course language is Swedish.
Department offering the course: MAI.
Director of Studies: Eva Enqvist
Examiner: Timo Koski
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Course Syllabus in Swedish

Linköping Institute of Technology

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Contact: TFK , val@tfk.liu.se
Last updated: 02/16/2003